those are before and after pics? they look almost the same to me. if either one is truly a before picture, then the brakes are set up incorrectly to begin with...the wedge is clamped too high on the cable or the barrel adjuster at the lever* is dialled out too far.
the brake arms should rest on the narrowest part of the wedge when the brake is not being used.
again, this picture is from a gen1 rear, and again the principle hasn't changed for gen2. note where upper brake arm rollers are resting.
it is a common error to think that brake pad width is adjusted by either moving the wedge up the cable or simply dialling out the barrel adjuster (*if you're running the Bontrager RXXXL brake levers). width adjustments on gen2 SC F&R brakes are meant to be done with the 2mm setscrews on the brake arms
won't guarantee that fixing this will solve the problem by itself, but we at least need to start from a properly set up brake :-)
Carl Matson